geneset-guided identification of cell types using single cell RNA-seq data

calculate_snr | Function to calculate Signal-to-noise Ratio between IN and... |

choose_unsupervised | Function to choose initial IN and OUT populations with linear... |

choose_with_negative_markers | Function to select initial OUT population from negative... |

choose_with_positive_markers | Function to select initial IN population from necessary... |

EM_for_dropout_estimation | Estimate Exponential and Normal distribution parameters with... |

initialize_prmt_exp | Initialize vector of paramaters for the mixture model |

loadfast | Function to read Gene Expression Matrix from file |

scid_match_cells | Main function to get Gene expression matrix and signature... |

update_prmt_exp | Update parameters |

weight_signature | Main function for estimation of gene ranks |

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