View source: R/plots_functions.R
Function to plot heatmap of average cluster-specific geneset expression in clusters of cells
1 | plot_score_2D(gem, labels, markers, clusterID, weights)
|
gem |
Data frame of gene expression (rows) per cell (columns) in target data |
labels |
List of cluster IDs for cells of gem |
markers |
Data frame of cluster specific genes with at least "gene", "cluster" and "avg_logFC" columns |
clusterID |
cluster ID of cluster of interest |
weights |
list of weighst of cluster specific genes as returned by scid_multiclass |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.