BatchSplitR: Function to split up xcms object by batch to perform a within...
In Beirnaert/MetaboMeeseeks: Helper functions for metabolomics analysis
Description
Usage
Arguments
Value
Author(s)
Description
Function to split up xcms object by batch to perform a within batch analysis and merge the results at the end.
Usage
1
BatchSplitR(xcmsObject, BatchClassLabel = NULL, BatchNames = NULL)
Arguments
xcmsObject
XCMS object after multi-batch retention time correction and grouping.
BatchClassLabel
The name of the vector containing the Batch identifier (in xcmsObject@phenoData)
BatchNames
(optional) A vector with the names of the individual batches to consider e.g. c("Batch1", "Batch2"). Note that this is only if a subset of all the batches have to be selected. Otherwise supplying BatchClassLabel is sufficient.
Value
xcmsObject.split A list with in each list entry an xcms object of a single batch.
Author(s)
Charlie Beirnaert, charlie.beirnaert@uantwerpen.be
Beirnaert/MetaboMeeseeks documentation built on May 20, 2019, 11:09 a.m.
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Description Usage Arguments Value Author(s)
Description
Function to split up xcms object by batch to perform a within batch analysis and merge the results at the end.
Usage
1 | BatchSplitR(xcmsObject, BatchClassLabel = NULL, BatchNames = NULL)
|
Arguments
xcmsObject |
XCMS object after multi-batch retention time correction and grouping. |
BatchClassLabel |
The name of the vector containing the Batch identifier (in xcmsObject@phenoData) |
BatchNames |
(optional) A vector with the names of the individual batches to consider e.g. c("Batch1", "Batch2"). Note that this is only if a subset of all the batches have to be selected. Otherwise supplying BatchClassLabel is sufficient. |
Value
xcmsObject.split A list with in each list entry an xcms object of a single batch.
Author(s)
Charlie Beirnaert, charlie.beirnaert@uantwerpen.be
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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