PeakFiltR: Peak Filtering
In Beirnaert/MetaboMeeseeks: Helper functions for metabolomics analysis
Description
Usage
Arguments
Value
Author(s)
Description
After peak picking this function filters out bad groups/features.
Usage
1
2
Arguments
XCMSobject
An xcmsSet object after peak picking.
min_RT_width
The minimal retention time width a peak must have
max_RT_width
The maximal retention time width a peak may have
max_ppm_width
The maximal allowed ppm width for a single peak
gauss_fail_threshold
The threshold for the egauss XCMS parameter, below which the peak is rejected.
Value
filtered xcmsSet object
Author(s)
Charlie Beirnaert, charlie.beirnaert@uantwerpen.be
Beirnaert/MetaboMeeseeks documentation built on May 20, 2019, 11:09 a.m.
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Description Usage Arguments Value Author(s)
Description
After peak picking this function filters out bad groups/features.
Usage
1 2 |
Arguments
XCMSobject |
An xcmsSet object after peak picking. |
min_RT_width |
The minimal retention time width a peak must have |
max_RT_width |
The maximal retention time width a peak may have |
max_ppm_width |
The maximal allowed ppm width for a single peak |
gauss_fail_threshold |
The threshold for the egauss XCMS parameter, below which the peak is rejected. |
Value
filtered xcmsSet object
Author(s)
Charlie Beirnaert, charlie.beirnaert@uantwerpen.be
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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