Description Usage Arguments Value Author(s) References
For convenience, if the data is generated by 10X genomics, user can use this function to input them. Of course, you can still handle the data to the standard type, then use "Input_preprocess()" function as well.
1 | Input_preprocess_10X(directory, sample_info_batch = NULL)
|
directory |
This is a directory, including "genes.tsv", "barcodes.tsv", "matrix.mtx", "cbc_gbc_dict.tsv", "cbc_gbc_dict_grna.tsv". |
sample_info_batch |
NULL by default. A character vector showing the batch of each sample. |
A list containing "expression profile", "sample_info_gene", "sample_info_sgRNA" and "sample_info_batch" if it is not NULL.
Bin Duan
http://satijalab.org/seurat/
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