categoryToEntrezBuilder: Return a list mapping category ids to Entrez Gene ids

In Bioconductor/Category: Category Analysis

Return a list mapping category ids to Entrez Gene ids

Description

Return a list mapping category ids to the Entrez Gene ids annotated at the category id. Only those category ids that have at least one annotation in the set of Entrez Gene ids specified by the geneIds slot of p are included.

Usage

categoryToEntrezBuilder(p)

Arguments

p	A subclass of HyperGParams-class

Details

End users should not call this directly. This method gets called from hyperGTest. To add support for a new category, a new method for this generic must be defined. Its signature should match a subclass of HyperGParams-class appropriate for the new category.

Value

A list mapping category ids to Entrez Gene identifiers.

Author(s)

S. Falcon

See Also

hyperGTest HyperGParams-class

Bioconductor/Category documentation built on Nov. 2, 2024, 6:33 a.m.