linearMTest: A linear model-based test to detect enrichment of unusual...
In Bioconductor/Category: Category Analysis
linearMTest R Documentation
A linear model-based test to detect enrichment of unusual genes
in categories
Description
Given a subclass of LinearMParams, compute p-values for
detecting systematic up or downregulation of the specified gene set in
the specified category.
Usage
linearMTest(p)
Arguments
p
An instance of a subclass of LinearMParams. This
parameter object determines the category of interest (currently,
only chromosome bands) as well as the gene set.
Details
The per-gene statistics in the geneStats slot of p give
a measure of up or down regulation of the individual genes in the
universe.
Value
A LinearMResult instance.
Author(s)
D. Sarkar
See Also
LinearMResult-class
LinearMParams-class
Bioconductor/Category documentation built on Nov. 2, 2024, 6:33 a.m.
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| linearMTest | R Documentation |
A linear model-based test to detect enrichment of unusual genes in categories
Description
Given a subclass of LinearMParams, compute p-values for
detecting systematic up or downregulation of the specified gene set in
the specified category.
Usage
linearMTest(p)
Arguments
p |
An instance of a subclass of |
Details
The per-gene statistics in the geneStats slot of p give
a measure of up or down regulation of the individual genes in the
universe.
Value
A LinearMResult instance.
Author(s)
D. Sarkar
See Also
LinearMResult-class
LinearMParams-class
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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