universeBuilder: Return a vector of gene identifiers with category annotations
In Bioconductor/Category: Category Analysis
universeBuilder R Documentation
Return a vector of gene identifiers with category annotations
Description
Return all gene ids that are annotated at one or more terms in the
category. If the universeGeneIds slot of p has length
greater than zero, then the intersection of the gene ids specified in
that slot and the normal return value is given.
Usage
universeBuilder(p)
Arguments
p
A subclass of HyperGParams-class
Details
End users should not call this directly. This method gets
called from hyperGTest. To add support for a new
category, a new method for this generic must be defined. Its
signature should match a subclass of
HyperGParams-class appropriate for the new
category.
Value
A vector of gene identifiers.
Author(s)
S. Falcon
See Also
hyperGTest
HyperGParams-class
Bioconductor/Category documentation built on Nov. 2, 2024, 6:33 a.m.
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| universeBuilder | R Documentation |
Return a vector of gene identifiers with category annotations
Description
Return all gene ids that are annotated at one or more terms in the
category. If the universeGeneIds slot of p has length
greater than zero, then the intersection of the gene ids specified in
that slot and the normal return value is given.
Usage
universeBuilder(p)
Arguments
p |
A subclass of |
Details
End users should not call this directly. This method gets
called from hyperGTest. To add support for a new
category, a new method for this generic must be defined. Its
signature should match a subclass of
HyperGParams-class appropriate for the new
category.
Value
A vector of gene identifiers.
Author(s)
S. Falcon
See Also
hyperGTest
HyperGParams-class
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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