FeatureDb-class: FeatureDb objects

Description Methods Author(s) See Also Examples

Description

The FeatureDb class is a generic container for storing genomic locations of an arbitrary type of genomic features.

See ?TxDb for a container for storing transcript annotations.

See ?makeFeatureDbFromUCSC for a convenient way to make FeatureDb objects from BioMart online resources.

Methods

In the code snippets below, x is a FeatureDb object.

metadata(x): Return x's metadata in a data frame.

Author(s)

Marc Carlson

See Also

Examples

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fdb_file <- system.file("extdata", "FeatureDb.sqlite",
                        package="GenomicFeatures")
fdb <- loadDb(fdb_file)
fdb

Bioconductor/GenomicFeatures documentation built on May 25, 2021, 5:47 a.m.