A set of tools and methods for making and manipulating transcript centric annotations. With these tools the user can easily download the genomic locations of the transcripts, exons and cds of a given organism, from either the UCSC Genome Browser or a BioMart database (more sources will be supported in the future). This information is then stored in a local database that keeps track of the relationship between transcripts, exons, cds and genes. Flexible methods are provided for extracting the desired features in a convenient format.
Package details |
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Bioconductor views | Annotation Genetics GenomeAnnotation Infrastructure Sequencing |
Maintainer | |
License | Artistic-2.0 |
Version | 1.57.1 |
URL | https://bioconductor.org/packages/GenomicFeatures |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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