Global functions | |
---|---|
as.RankedTestSet | Source code |
as.UnrankedTestSet | Source code |
boolJaccard | Source code |
buildEdgeTable | Source code |
buildSetCollection | Man page Source code |
buildSetNet | Source code |
calculateSetRank | Source code |
createCytoscapeVizMap | Man page Source code |
createGeneNetVizFile | Source code |
createIDConverter | Man page Source code |
createPathwayTable | Man page Source code |
createSet | Source code |
cytoscapeExport | Man page Source code |
expandWithTermOffspring | Source code |
exportGeneNets | Man page Source code |
exportMultipleResults | Man page Source code |
exportSingleResult | Man page Source code |
fisherCriticalValues | Source code |
fisherPValue | Source code |
fixGraphML | Man page Source code |
generateContinuousMapping | Man page Source code |
generatePMapping | Man page Source code |
getAdjustedPValues | Source code |
getConditionOrder | Source code |
getCorrectedPValues | Source code |
getIntersectionPValue | Source code |
getLogFCTable | Source code |
getMaxP | Source code |
getMissingNodes | Source code |
getNodeTable | Source code |
getNodesToDelete | Source code |
getPValueTable | Source code |
getPrimarySetPValues | Source code |
getSetPValue | Source code |
getSetPValue.RankedTestSet | Source code |
getSetPValue.UnrankedTestSet | Source code |
getSetPairStatistics | Source code |
getSetPairStatistics.RankedTestSet | Source code |
getSetPairStatistics.UnrankedTestSet | Source code |
getSetPairStatistics_base | Source code |
getSignificantIntersections | Source code |
handleProperty | Source code |
intersectionTest | Source code |
jaccardDistanceMatrix | Source code |
membershipTable | Man page Source code |
minimalI | Source code |
orderTable | Source code |
pAdjustAndCorrect | Source code |
pack | Source code |
propertyFunctions | Man page |
setGlobalAttributes | Source code |
setRankAnalysis | Man page Source code |
setRankPValue | Source code |
sinkDelete | Source code |
sinkDeletePValue | Source code |
styleXML | Man page |
uniqueCount | Source code |
unpack | Source code |
writeGeneSetNetwork | Source code |
writeMembership | Source code |
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