membershipTable: Create a gene set membership table.
In C3c6e6/SetRank: Advanced Gene Set Enrichment Analysis

Description Usage Arguments Author(s) References

Creates a table showing which significant genes belong to which significant gene sets. This table allows to investigate the results of a SetRank analysis in more detail.

1	membershipTable(selectedGenes, collection, network)

`selectedGenes`	The set of significant genes used during the SetRank analysis.
`collection`	The setCollection used during the SetRank analysis.
`network`	A network generated by the `setRankAnalysis` function.

Cedric Simillion

A matrix of boolean values. The rownames are the geneIDs, the column names are the gene set IDs. A TRUE value in a cell indicates that the gene of the row is present in the gene set of the column; FALSE means otherwise.

C3c6e6/SetRank documentation built on May 6, 2019, 9:12 a.m.