Man pages for C3c6e6/SetRank
Advanced Gene Set Enrichment Analysis
| buildSetCollection | Create a gene set collection |
| createCytoscapeVizMap | Create a Cytoscape visual style for one or more SetRank... |
| createIDConverter | Create a function to convert gene or protein IDs |
| createPathwayTable | Creates a table of all significant pathways in different... |
| cytoscapeExport | Prepare networks for visualization in Cytoscape |
| exportGeneNets | Create gene interaction networks for all significant gene... |
| exportMultipleResults | Export multiple SetRank networks and accompanying tables. |
| exportSingleResult | Export a SetRank network and accompanying tables. |
| fixGraphML | Fix the igraph graphML export |
| generateContinuousMapping | Generates a continuous VizMap property mapping. |
| generatePMapping | Generates a visual property mapping for p-value attributes |
| membershipTable | Create a gene set membership table. |
| propertyFunctions | Attribute handlers for generating the VizMap XML |
| setRankAnalysis | Advanced gene set enrichment analysis. |
| styleXML | VizMap XML template |
