umap_tsne_onLC: genetrate new UMAP and TSNE coordinates given LCA object

In CHuanSite/SJD: Structured Joint Decomposition (SJD)

genetrate new UMAP and TSNE coordinates given LCA object

Description

genetrate new UMAP and TSNE coordinates given LCA object

Usage

umap_tsne_onLC(twoStageLCAobj, group, n_comp, add_to_meta, meta_list)

Arguments

twoStageLCAobj	list output of tsLCA run, list
group	name of the weights group from the SJD_algorithm output, i.e 'Shared.All.13'
n_comp	number of components to make umaps and tsne, int
add_to_meta	adds tsne and umap coordinates to metadata, bool
meta_list	Meta.List that was passed into SJD run, str

CHuanSite/SJD documentation built on Nov. 29, 2024, 5:52 a.m.