get_spawning_adults: Get Spawning Adults
In CVPIA-OSC/lateFallRunDSM: Structured Decision Fall Run Model for CVPIA

get_spawning_adults

R Documentation

Get Spawning Adults

Description

Get Spawning Adults

Usage

get_spawning_adults(
  year,
  adults,
  hatch_adults,
  mode,
  month_return_proportions,
  prop_flow_natal,
  south_delta_routed_watersheds,
  cc_gates_days_closed,
  gates_overtopped,
  tisdale_bypass_watershed,
  yolo_bypass_watershed,
  migratory_temperature_proportion_over_20,
  natural_adult_removal_rate,
  cross_channel_stray_rate,
  stray_rate,
  ..surv_adult_enroute_int,
  .adult_stray_intercept,
  .adult_stray_wild,
  .adult_stray_natal_flow,
  .adult_stray_cross_channel_gates_closed,
  .adult_stray_prop_bay_trans,
  .adult_stray_prop_delta_trans,
  .adult_en_route_migratory_temp,
  .adult_en_route_bypass_overtopped,
  .adult_en_route_adult_harvest_rate,
  stochastic
)

Arguments

`year`	the year of simulation
`adults`	potential spawning adults for each watershed (length = 31) values must be integer
`hatch_adults`	total hatchery adults
`mode`	a value meant to be inherited to determine if model is in "seed", "calibrate", or "simulate" mode
`month_return_proportions`	The proportion of fish returning for each month
`prop_flow_natal`	More details at `proportion_flow_natal`
`south_delta_routed_watersheds`	More details at `south_delta_routed_watersheds`
`cc_gates_days_closed`	More details at `delta_cross_channel_closed`
`gates_overtopped`	More details at `gates_overtopped`
`tisdale_bypass_watershed`	More details at `tisdale_bypass_watershed`
`yolo_bypass_watershed`	More details at `yolo_bypass_watershed`
`migratory_temperature_proportion_over_20`	More details at `migratory_temperature_proportion_over_20`
`natural_adult_removal_rate`	More details at `natural_adult_removal_rate`
`cross_channel_stray_rate`	More details at `cross_channel_stray_rate`
`stray_rate`	More details at `stray_rate`
`..surv_adult_enroute_int`	Intercept for `surv_adult_enroute`
`.adult_stray_intercept`	Intercept for `adult_stray`
`.adult_stray_wild`	Coefficient for `adult_stray` `wild` variable
`.adult_stray_natal_flow`	Coefficient for `adult_stray` `natal_flow` variable
`.adult_stray_cross_channel_gates_closed`	Coefficient for `adult_stray` `cross_channel_gates_closed` variable
`.adult_stray_prop_bay_trans`	Coefficient for `adult_stray` `prop_bay_trans` variable
`.adult_stray_prop_delta_trans`	Coefficient for `adult_stray` `prop_delta_trans` variable
`.adult_en_route_migratory_temp`	Coefficient for `surv_adult_enroute` `migratory_temp` variable
`.adult_en_route_bypass_overtopped`	Coefficient for `surv_adult_enroute` `bypass_overtopped` variable
`.adult_en_route_adult_harvest_rate`	Adult harvest rate for `surv_adult_enroute`
`stochastic`	TRUE FALSE value indicating if model is being run stochastically