Blank2022peaks: Example peaks from Blank 2022
In CeMOS-Mannheim/MALDIcellassay: Automated MALDI Cell Assays Using Dose-Response Curve Fitting
Blank2022peaks R Documentation
Example peaks from Blank 2022
Description
Peaks from MALDI mass spectrometry data of EOC cells treated with different concentrations of SAHA.
It is used to demonstrate the usage of MALDIcellassay.
Usage
data(Blank2022peaks)
Format
A list of MALDIquant::MassPeaks-objects named with the respective concentration.
Details
The concentrations include: 0, 0.04, 0.12, 0.37, 1.11, 3.33, 10 and 30 uM of SAHA at 4 replicates each.
The original spectra were trimmed to 400-900 Da mass-range to keep the file size small.
The peaks are the result of applying MALDIquant::detectPeaks to Blank2022spec with arguments SNR = 3, method = "SuperSmoother".
References
Blank, M., Enzlein, T. & Hopf, C. LPS-induced lipid alterations in microglia revealed by MALDI mass spectrometry-based cell fingerprinting in neuroinflammation studies. Sci Rep 12, 2908 (2022). https://doi.org/10.1038/s41598-022-06894-1
CeMOS-Mannheim/MALDIcellassay documentation built on Jan. 24, 2025, 11:17 p.m.
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| Blank2022peaks | R Documentation |
Example peaks from Blank 2022
Description
Peaks from MALDI mass spectrometry data of EOC cells treated with different concentrations of SAHA.
It is used to demonstrate the usage of MALDIcellassay.
Usage
data(Blank2022peaks)
Format
A list of MALDIquant::MassPeaks-objects named with the respective concentration.
Details
The concentrations include: 0, 0.04, 0.12, 0.37, 1.11, 3.33, 10 and 30 uM of SAHA at 4 replicates each.
The original spectra were trimmed to 400-900 Da mass-range to keep the file size small.
The peaks are the result of applying MALDIquant::detectPeaks to Blank2022spec with arguments SNR = 3, method = "SuperSmoother".
References
Blank, M., Enzlein, T. & Hopf, C. LPS-induced lipid alterations in microglia revealed by MALDI mass spectrometry-based cell fingerprinting in neuroinflammation studies. Sci Rep 12, 2908 (2022). https://doi.org/10.1038/s41598-022-06894-1
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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