plotCurves: generate ggplot objects for each of the curve fits in a...

In CeMOS-Mannheim/MALDIcellassay: Automated MALDI Cell Assays Using Dose-Response Curve Fitting

generate ggplot objects for each of the curve fits in a MALDIassay object

Description

generate ggplot objects for each of the curve fits in a MALDIassay object

Usage

plotCurves(object, mzIdx = NULL, errorbars = c("none", "sd", "sem"))

Arguments

object	object of class MALDIassay
mzIdx	numeric, indicies of mz values to plot (see getPeakStatistics()). Note, fc_thresh and R2_thresh filters do not apply if mzIdx is set!
errorbars	character, add error bars to plot. Either standard error of the mean (sem) or standard deviation (sd) in regards to the measurement replicates or no errorbars (none).

Value

list of ggplot objects

Examples

data(Blank2022res)
plotCurves(Blank2022res, mzIdx = 2, errorbars = "sd")

CeMOS-Mannheim/MALDIcellassay documentation built on Jan. 24, 2025, 11:17 p.m.