extractIntensity: Extract intensity using peaks as template

In CeMOS-Mannheim/MALDIcellassay: Automated MALDI Cell Assays Using Dose-Response Curve Fitting

Extract intensity using peaks as template

Description

Extract intensity using peaks as template

Usage

extractIntensity(mz, peaks, spec, tol)

Arguments

mz	numeric, mz values to be extracted from the peaks/spectra
peaks	MALDIquant::MassPeaks list
spec	MALDIquant::MassSpectrum list
tol	numeric, tolerance in Da

Value

MALDIquant::MassPeaks list with extracted intensities from spec at m/z of peaks = pseudo peaks. Useful in combination with sdMassSpectrum to get standard deviation of peaks as intensity matrix.

Examples

data(Blank2022peaks)
data(Blank2022spec)

int <- extractIntensity(mz = c(409, 423, 440), 
                        peaks = Blank2022peaks, 
                        spec = Blank2022spec, 
                        tol = 0.2)
head(int)

CeMOS-Mannheim/MALDIcellassay documentation built on Jan. 24, 2025, 11:17 p.m.