JacCol_constr_noLab: The jacobian of the response function without taxon labels

In CenterForStatistics-UGent/RCM: Fit row-column association models with the negative binomial distribution for the microbiome

The jacobian of the response function without taxon labels

Description

The jacobian of the response function without taxon labels

Usage

JacCol_constr_noLab(
  betas,
  X,
  reg,
  thetasMat,
  muMarg,
  psi,
  n,
  v,
  preFabMat,
  allowMissingness,
  naId
)

Arguments

betas	a vector of regression parameters with length v
X	the nxp data matrix
reg	a matrix of regressors of dimension nxv
thetasMat	A matrix of dispersion parameters
muMarg	offset matrix of dimension nxp
psi	a scalar, the importance parameter
n	an integer, number of rows of X
v	an integer, the number of parameters of the response function
preFabMat	a prefabricated matrix
allowMissingness	A boolean, are missing values present
naId	The numeric index of the missing values in X

Value

The jacobian (a v-by-v matrix)

CenterForStatistics-UGent/RCM documentation built on April 24, 2023, 8:26 p.m.