CenterForStatistics-UGent/RCM: Fit row-column association models with the negative binomial distribution for the microbiome
Version 0.1.0

Combine ideas of log-linear analysis of contingency table, flexible response function estimation and empirical Bayes dispersion estimation for explorative visualization of microbiome datasets. includes unconstrained as well as constrained analysis.

Getting started

Package details

AuthorStijn Hawinkel <[email protected]>
Bioconductor views DimensionReduction Metagenomics Microbiome Visualization
MaintainerJoris Meys <[email protected]>
LicenseGPL-2
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("CenterForStatistics-UGent/RCM")
CenterForStatistics-UGent/RCM documentation built on July 15, 2018, 9:50 p.m.