write_metadata: Write metadata to a h5 file

In ChristopherBarrington/scviewer: A Shiny App to Display Single-Cell -Seq Datasets

Write metadata to a h5 file

Description

Write metadata to a h5 file

Get dataset meta data

Usage

write_metadata(h5_file, metadata, ...)

guess_metadata(seurat)

Arguments

h5_file	Path to h5 file
metadata	A data.frame of meta data
...	Arguments passed to guess_metadata
seurat	Seurat object

Details

Extracts the factor- or character-type variables from the seurat meta data, but it uses !is.numeric!

Functions

• write_metadata: Write meta data to h5 file

• guess_metadata: Select non-numeric variables from the meta data slot

ChristopherBarrington/scviewer documentation built on June 30, 2023, 5:34 p.m.