write_reductions: Write reduction information to a h5 file
In ChristopherBarrington/scviewer: A Shiny App to Display Single-Cell -Seq Datasets
View source: R/h5_reductions.R
write_reductions R Documentation
Write reduction information to a h5 file
Description
Write reduction information to a h5 file
Get a reductions list
Usage
write_reductions(h5_file, reductions, ...)
guess_reductions(seurat)
Arguments
h5_file
Path to h5 file
reductions
A list of cell coordinates
...
Arguments passed to guess_reductions
seurat
Seurat object
Details
Creates a list of 2D and 3D coordinates for reductions in seurat.
Functions
-
write_reductions: Write coordinates for reductions to h5 file
-
guess_reductions: Create a list of coordinates for reductions
ChristopherBarrington/scviewer documentation built on June 30, 2023, 5:34 p.m.
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View source: R/h5_reductions.R
| write_reductions | R Documentation |
Write reduction information to a h5 file
Description
Write reduction information to a h5 file
Get a reductions list
Usage
write_reductions(h5_file, reductions, ...)
guess_reductions(seurat)
Arguments
h5_file |
Path to |
reductions |
A |
... |
Arguments passed to |
seurat |
Seurat object |
Details
Creates a list of 2D and 3D coordinates for reductions in seurat.
Functions
-
write_reductions: Write coordinates for reductions toh5file -
guess_reductions: Create a list of coordinates for reductions
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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