plot_MA: Plot the average of the condition group against the...
In ClaudiaRHD/chipAnalyser: R package for rapid ChIP-seq data analysis and visualisation.
Description
Compare the mean of area under the curve signal for data sets according to the inserted conditions. The conditions are adjusted to the anno-file where the conditions for all data sets are collated. Plots the average of both inserted conditions against the difference of the binary logarithm of the two conditions.
Usage
1
Arguments
aucpi
A data.table. Output of "auc_pi" function. Default value is NULL.
anno
A data.frame with the assignment of the bigWig files to the conditions. Default value is NULL.
cond
A character vector with two conditions according to the anno data.frame and the bigWig files which should be compared.
ClaudiaRHD/chipAnalyser documentation built on June 18, 2020, 8:31 p.m.
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Description
Compare the mean of area under the curve signal for data sets according to the inserted conditions. The conditions are adjusted to the anno-file where the conditions for all data sets are collated. Plots the average of both inserted conditions against the difference of the binary logarithm of the two conditions.
Usage
1 |
Arguments
aucpi |
A data.table. Output of "auc_pi" function. Default value is NULL. |
anno |
A data.frame with the assignment of the bigWig files to the conditions. Default value is NULL. |
cond |
A character vector with two conditions according to the anno data.frame and the bigWig files which should be compared. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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