MS Data

add_canopus	Add CANOPUS classification
alignment	Apply Peak alignment
apply_gap_filling	Apply Gap Filling
apply_peak_refinement	Apply Peak Refinement
calculate_clustering	Multivariate analysis - Clustering
calculate_permanova	Multivariate analysis - PERMANOVA
centroid_check	Check Centroided
check_model	Check model performance
correspondence	Apply Correspondence
data_filtering	Filter by prevalence
differential_analysis	Differential analysis
extract_abundance_table	Extract abundance table
extract_autotuner	Extract parameters AutoTuner
extract_feature_chromatograms	Extract feature chromatograms
extract_feature_definitions	Extract feature definitions
extract_feature_spectra	Extract feature spectra
fit_models	Fit linear models
get_annotation_tables	Get annotation tables
get_molecular_class	Classify metabolites
load_dataframe	Load dataframe
load_metadata	Load Metadata
load_spectra_data	Load Spectra Data
merge_annotation_tables	Merge annotation tables
normalization	Normalize data
ordination_methods	Multivariate analysis - Ordination
ordination_plot	Multivariate analysis - Plot Ordination
peak_picking	Apply Peak Picking
pipe	Pipe operator
plot_da_sig_features	Heatmap significant features
plot_mirror	Plot spectra annotation mirror
plot_model_sig_features	Heatmap significant features
plot_volcano	Volcano plot
run_app	Run the Shiny Application
start_autotuner	Start autotuner
test_contrasts	Test contrasts
test_peak_picking	Test Peak Picking