load_spectra_data: Load Spectra Data

In Coayala/MetaboTandem: Analysis and Visualization of LC-MS/MS Data

Load Spectra Data

Description

Loads spectra data in mzML or mzXML format using the xcms package.

Usage

load_spectra_data(datadir, metadata, format = "mzML", mode = "onDisk")

Arguments

datadir	Path to the directory containing the data files.
metadata	Contains sample information. Each row represents a sample and columns contain metadata information.
format	Specifies the format of the data files. Default is 'mzML'. Supported formats include 'mzML' and 'mzXML'.
mode	Specifies the mode of operation. Default is 'onDisk'. Other modes depend on xcms package capabilities.

Details

Load Spectra data This function is intended to load the spectra data in mzML or mzXML format using the xcms package

Value

An object containing the loaded spectra data.

Coayala/MetaboTandem documentation built on Feb. 14, 2025, 1:22 p.m.