calculate_clustering: Multivariate analysis - Clustering
In Coayala/MetaboTandem: Analysis and Visualization of LC-MS/MS Data
View source: R/fct_stats_multi.R
calculate_clustering R Documentation
Multivariate analysis - Clustering
Description
Function to calculate ordination with different methods
Usage
calculate_clustering(
abun_table,
metadata,
color_by,
distance = "euclidean",
cluster_algorithm = "ward.D2",
add_kmeans = FALSE,
k = 3,
plot = TRUE,
color_vector = NULL
)
Arguments
abun_table
Feature abundance table
k
Selecte K (for kmeans method)
method
Clustering method
Coayala/MetaboTandem documentation built on June 9, 2025, 9:02 p.m.
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View source: R/fct_stats_multi.R
| calculate_clustering | R Documentation |
Multivariate analysis - Clustering
Description
Function to calculate ordination with different methods
Usage
calculate_clustering(
abun_table,
metadata,
color_by,
distance = "euclidean",
cluster_algorithm = "ward.D2",
add_kmeans = FALSE,
k = 3,
plot = TRUE,
color_vector = NULL
)
Arguments
abun_table |
Feature abundance table |
k |
Selecte K (for kmeans method) |
method |
Clustering method |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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