krsa_quick_filter: Filters out low signal peptides AND none linear peptides

In CogDisResLab/KRSA: KRSA: Kinome Random Sampling Analyzer

Filters out low signal peptides AND none linear peptides

Description

This function takes in pw data max exposure, modeled pw data, signal threshold, R2 threshold, and samples and groups names (optional) and returns peptides that passed these conditions

Usage

krsa_quick_filter(
  data,
  data2,
  signal_threshold,
  r2_threshold,
  samples = NULL,
  groups = NULL
)

Arguments

data	pw data max exposure
data2	modeled pw data
signal_threshold	signal threshold
r2_threshold	R2 threshold
samples	sample names
groups	group names

Value

vector of peptides

See Also

Other core functions: krsa(), krsa_group_diff(), krsa_read(), krsa_scaleModel()

Examples

TRUE

CogDisResLab/KRSA documentation built on Sept. 27, 2024, 2:03 p.m.