krsa_sampling: Performs random sampling of peptides and mapped kinases

In CogDisResLab/KRSA: KRSA: Kinome Random Sampling Analyzer

Performs random sampling of peptides and mapped kinases

Description

This function takes number of iterations, coverage file, kinase-substrate mapping df, and the length of the set of peptides to resample

Usage

krsa_sampling(x, CovFile, map, sum_num)

Arguments

x	number of iterations
CovFile	kinase coverage df
map	kinase-substrate mapping df
sum_num	number of peptides to resample

Value

count of kinases hits to random peptides

See Also

Other helper functions: enrichr_lib_call(), krsa_ce_output_kinases(), krsa_ce_output_peptides(), krsa_enrichr(), krsa_extractEndPoint(), krsa_extractEndPointMaxExp(), krsa_get_diff(), krsa_get_diff_byChip(), krsa_show_peptides(), krsa_top_hits()

Examples

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CogDisResLab/KRSA documentation built on Sept. 27, 2024, 2:03 p.m.