Files in Cortalak/cellID
Unbiased Extraction of Single Cell Identity using Multiple Correspondence Analysis
.gitignore
CelliD.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/RcppExports.R
R/cell.R
R/check.R
R/data.R
R/group.R
R/gsea.R
R/hyper.R
R/import.R
R/mca.R
R/mcaAndReduction.R
R/visualisation.R
README.md
data/GO_biological.rda
data/Hallmark.rda
data/HgProteinCodingGenes.rda
data/MgProteinCodingGenes.rda
data/seuratPbmc.rda
inst/CITATION
inst/NEWS.Rd
man/DimPlotMC.Rd
man/DistSort.Rd
man/GO_biological.Rd
man/GetCellGeneDistance.Rd
man/GetCellGeneRanking.Rd
man/GetCellGeneSet.Rd
man/GetGSEAMatrix.Rd
man/GetGeneCellCoordinates.Rd
man/GetGroupCoordinates.Rd
man/GetGroupGeneDistance.Rd
man/GetGroupGeneRanking.Rd
man/GetGroupGeneSet.Rd
man/Hallmark.Rd
man/HgProteinCodingGenes.Rd
man/MgProteinCodingGenes.Rd
man/RunCellGSEA.Rd
man/RunCellHGT.Rd
man/RunGroupGSEA.Rd
man/RunMCA.Rd
man/RunMCDMAP.Rd
man/RunMCTSNE.Rd
man/RunMCUMAP.Rd
man/cellID-package.Rd
man/checkCellIDArg.Rd
man/fgseaCellID.Rd
man/import.Rd
man/integrateGSEASeurat.Rd
man/pairDist.Rd
man/plotReducedDimMC.Rd
man/setDimMCSlot.Rd
man/seuratPbmc.Rd
src/.gitignore
src/Makevars
src/Makevars.win
src/RcppExports.cpp
src/dist.cpp
src/mca.cpp
src/order.cpp
tools/sticker.jpg
tools/sticker.png
vignettes/BioconductorVignette.Rmd
vignettes/BioconductorVignette.html
vignettes/vign.Rmd
vignettes/vign.html
