Files in Czh3/iSpatial
infer transcriptome-wide spatial expression via integration of scRNA and spRNA
DESCRIPTION
NAMESPACE
R/cross_validation.R
R/data.R
R/iSpatial.R
R/spatial_cor.R
R/spatial_variable_gene.R
README.md
benchmark/BenchMark.R
benchmark/benchmark_9datasets.pdf
benchmark/benchmark_merge9datasets.pdf
data/NA_merFISH.rda
data/NA_scRNA.rda
iSpatial.Rproj
iSpatial_method.png
iSpatial_rationale.png
man/NA_merFISH.Rd
man/NA_scRNA.Rd
man/cluster_spatial_expr_pattern.Rd
man/cross_validation.Rd
man/get_spatial_features.Rd
man/get_spatial_features_image.Rd
man/infer.Rd
man/infer_harmony.Rd
man/infer_rPCA.Rd
man/infer_v2.Rd
man/intergrate.Rd
man/recommend_k.Rd
man/run_harmony.Rd
man/sample_region.Rd
man/sparse.cor.Rd
man/spatial_cor.Rd
man/spatial_signature_plot.Rd
man/spatial_var_gene_slice.Rd
man/spatial_variable_genes.Rd
man/stabilize_expr.Rd
vignettes/.gitignore
vignettes/Cortex_example.Rmd
vignettes/Cortex_example.html
vignettes/figure/Acbd7_after-1.png
vignettes/figure/SVGs-1.png
vignettes/figure/SVGs-2.png
vignettes/figure/Tac2-1.png
vignettes/figure/cluster_SVG-1.png
vignettes/figure/cluster_SVG-2.png
vignettes/figure/example-1.png
vignettes/figure/example-2.png
vignettes/introduction.Rmd
vignettes/introduction.html
vignettes/introduction.md
