get_spatial_features_image: get spatial expression features in each image

In Czh3/iSpatial: infer transcriptome-wide spatial expression via integration of scRNA and spRNA

get spatial expression features in each image

Description

get spatial expression features in each image

Usage

get_spatial_features_image(obj, assay, feature, img, bin, n.core = 1)

Arguments

obj	seurat object
assay	assay to use
feature	features (genes) to get spatial expression patterns
img	choose image
bin	number of bins used to segregate the image
n.core	number of CPU cores used

Value

return a matrix. row: gene, column: spatial expression features

Czh3/iSpatial documentation built on Sept. 15, 2022, 10:32 p.m.