cross_validation: 10 fold cross validation

In Czh3/iSpatial: infer transcriptome-wide spatial expression via integration of scRNA and spRNA

10 fold cross validation

Description

10 fold cross validation

Usage

cross_validation(
  spRNA,
  scRNA,
  fold = 10,
  correct.spRNA = TRUE,
  correct.scRNA = FALSE
)

Arguments

spRNA	seurat object of spatial transcriptome
scRNA	seurat object of scRNA-seq
fold	number of X fold crossing validation
correct.spRNA	Whether to stabilize expression in spRNA.
correct.scRNA	Whether to stabilize expression in scRNA.

Value

correlation between inferred spatial expression and ground true.

Czh3/iSpatial documentation built on Sept. 15, 2022, 10:32 p.m.