get_spatial_features: Get spatial expression features
In Czh3/iSpatial: infer transcriptome-wide spatial expression via integration of scRNA and spRNA
View source: R/spatial_variable_gene.R
get_spatial_features R Documentation
Get spatial expression features
Description
Get spatial expression features
Usage
get_spatial_features(obj, assay, feature, bin, n.core = 1)
Arguments
obj
seurat object
assay
assay to use
feature
features (genes) to get spatial expression patterns
bin
number of bins used to segregate the image
n.core
number of CPU cores used
Value
return a matrix. row: gene, column: spatial expression features
Czh3/iSpatial documentation built on Sept. 15, 2022, 10:32 p.m.
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View source: R/spatial_variable_gene.R
| get_spatial_features | R Documentation |
Get spatial expression features
Description
Get spatial expression features
Usage
get_spatial_features(obj, assay, feature, bin, n.core = 1)
Arguments
obj |
seurat object |
assay |
assay to use |
feature |
features (genes) to get spatial expression patterns |
bin |
number of bins used to segregate the image |
n.core |
number of CPU cores used |
Value
return a matrix. row: gene, column: spatial expression features
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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