API for DepMap-Analytics/CoRe
CoRe R package
| Global functions | |
|---|---|
| BAGEL_essential | Man page |
| BAGEL_nonEssential | Man page |
| CoRe.ADaM | Man page Source code |
| CoRe.AssembleFPs | Man page Source code |
| CoRe.Binarize_Matrix | Man page Source code |
| CoRe.CF_Benchmark | Man page Source code |
| CoRe.CS_ADaM | Man page Source code |
| CoRe.FiPer | Man page Source code |
| CoRe.PanCancer_ADaM | Man page Source code |
| CoRe.VisCFness | Man page Source code |
| CoRe.coreFitnessGenes | Man page Source code |
| CoRe.download_AnnotationModel | Man page Source code |
| CoRe.download_BinaryDepMatrix | Man page Source code |
| CoRe.download_DepMatrix | Man page Source code |
| CoRe.empiricalOdds | Man page Source code |
| CoRe.extract_tissueType_SubMatrix | Man page Source code |
| CoRe.generateNullModel | Man page Source code |
| CoRe.panessprofile | Man page Source code |
| CoRe.randomisedepMat | Man page Source code |
| CoRe.scale_to_essentials | Man page Source code |
| CoRe.tradeoffEO_TPR | Man page Source code |
| CoRe.truePositiveRate | Man page Source code |
| EssGenes.DNA_REPLICATION_cons | Man page |
| EssGenes.HISTONES | Man page |
| EssGenes.KEGG_rna_polymerase | Man page |
| EssGenes.PROTEASOME_cons | Man page |
| EssGenes.SPLICEOSOME_cons | Man page |
| EssGenes.ribosomalProteins | Man page |
| FDR_Threshold | Source code |
| HeuristicMutExSorting | Source code |
| curated_BAGEL_essential | Man page |
| curated_BAGEL_nonEssential | Man page |
| findBestInClass | Source code |
| rearrangeMatrix | Source code |
