EssGenes.HISTONES: Core Fitness essential histone genes
In DepMap-Analytics/CoRe: CoRe R package
EssGenes.HISTONES R Documentation
Core Fitness essential histone genes
Description
List of core fitness essential histone genes assembled by merging together multilpe signatures from MSigDB [1] as detailed in [2].
Usage
data("EssGenes.HISTONES")
Format
A vector of strings containing HGNC symbols.
References
[1] Subramanian, A., Tamayo, P., Mootha, V. K., Mukherjee, S., Ebert, B. L., Gillette, M. A., et al. (2005). Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proceedings of the National Academy of Sciences of the United States of America, 102(43), 15545-15550. http://doi.org/10.1073/pnas.0506580102
[2] Iorio, F., Behan, F. M., Goncalves, E., Beaver, C., Ansari, R., Pooley, R., et al. (n.d.). Unsupervised correction of gene-independent cell responses to CRISPR-Cas9 targeting.
http://doi.org/10.1101/228189
Examples
data(EssGenes.HISTONES)
head(EssGenes.HISTONES)
DepMap-Analytics/CoRe documentation built on July 6, 2022, 8:01 a.m.
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| EssGenes.HISTONES | R Documentation |
Core Fitness essential histone genes
Description
List of core fitness essential histone genes assembled by merging together multilpe signatures from MSigDB [1] as detailed in [2].
Usage
data("EssGenes.HISTONES")
Format
A vector of strings containing HGNC symbols.
References
[1] Subramanian, A., Tamayo, P., Mootha, V. K., Mukherjee, S., Ebert, B. L., Gillette, M. A., et al. (2005). Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proceedings of the National Academy of Sciences of the United States of America, 102(43), 15545-15550. http://doi.org/10.1073/pnas.0506580102
[2] Iorio, F., Behan, F. M., Goncalves, E., Beaver, C., Ansari, R., Pooley, R., et al. (n.d.). Unsupervised correction of gene-independent cell responses to CRISPR-Cas9 targeting.
http://doi.org/10.1101/228189
Examples
data(EssGenes.HISTONES) head(EssGenes.HISTONES)
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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