BAGEL_nonEssential: Reference set of non essential genes

In DepMap-Analytics/CoRe: CoRe R package

Reference set of non essential genes

Description

A list of reference non essential genes assembled from multiple RNAi studies used as classification template by the BAGEL algorithm to call gene depletion significance [1].

Usage

data(BAGEL_nonEssential)

Format

A vector of strings containing HGNC symbols of reference non essential genes.

References

[1] Hart T, Chandrashekhar M, Aregger M, Steinhart Z, Brown KR, MacLeod G, Mis M, Zimmermann M, Fradet-Turcotte A, Sun S, Mero P, Dirks P, Sidhu S, Roth FP, Rissland OS, Durocher D, Angers S, Moffat J. High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities. Cell. 2015 Dec 3;163(6):1515-26

See Also

BAGEL_essential

Examples

data(BAGEL_nonEssential)
head(BAGEL_nonEssential)

DepMap-Analytics/CoRe documentation built on July 6, 2022, 8:01 a.m.