splicingDistribution: Proportion of events by splicing type.

Description Usage Arguments Value Examples

View source: R/plotEvents.R

Description

Proportion of events by splicing type.

Usage

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splicingDistribution(events, fdr = 0.05, deltaPSI = 0.1)

Arguments

events

a maser object.

fdr

numeric, FDR (False Discovery Rate) cutoff.

deltaPSI

numeric, absolute minimum PSI (Percent spliced-in) change

Value

a ggplot object.

Examples

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path <- system.file("extdata", file.path("MATS_output"), package = "maser")
hypoxia <- maser(path, c("Hypoxia 0h", "Hypoxia 24h"))
hypoxia_filt <- filterByCoverage(hypoxia, avg_reads = 5)
splicingDistribution(hypoxia_filt)

DiogoVeiga/maser documentation built on Feb. 10, 2022, 10:10 a.m.