R/data.R

In ETHZ-INS/epiwraps: epiwraps: Wrappers for plotting and dealing with epigenomics data

#' @rdname exampleESE
#' @name exampleESE
#' @aliases exampleESE
#'
#' @title Example EnrichmentSE object
#'
#' @description
#' Small sample signal from ENCODE ChIP-seq for H3K27ac, H3K4me3 and p300, 
#' around some p300 binding sites and TSS in mESC.
#'
#' @return a named character vector of length 1.
NULL


#' @rdname exampleDNAme
#' @name exampleDNAme
#' @aliases geneBodies
#'
#' @title Example DNAme data on some active gene bodies
#'
#' @description
#' A GRanges object (called `geneBodies`) containing the coordinates of some 
#' gene bodies on chr9 of hg38, as well as a GPos object (called `exampleDNAme`)
#' containing methylation percentages at CpGs in those regions. Taken from WG 
#' bisulfite sequencing data from A549, from ENCODE accession ID ENCFF948WVD.
#'
#' @return a named character vector of length 2.
NULL