SMOLR_POINT_FEATURES: SMOLR COORDINATE-BASED FEATURES

In ErasmusOIC/SMoLR: Single Molecule Localization Microscopy visualization and analysis in R

SMOLR COORDINATE-BASED FEATURES

Description

Extraction of features based on the coordinates of the localization data

Usage

SMOLR_POINT_FEATURES(x)

Arguments

x	itemx localization data, SMOLR_DBSCAN or SMOLR_KDE object, can be a list of objects itemskeleton estimate the skeleton length, using skeltonization of a binary image.

Value

A data.frame with columns indicating the different obtained values

Author(s)

Optical Imaging Centre ErasmusMC Rotterdam

Examples

#obtain statistics for a localization data.frame
x1<-SMOLR_POINT_FEATURES(smolrdata)
x1
#obtain statistics after clustering using SMOLR_KDE
x2<-SMOLR_POINT_FEATURES(SMOLR_KDE(smolrdata))
x2
#obtain statistics after clustering using SMOLR_DBSCAN
x3<-SMOLR_POINT_FEATURES(SMOLR_DBSCAN(smolrdata,MinPts=10))
x3  

ErasmusOIC/SMoLR documentation built on July 27, 2023, 8:05 p.m.