FrankD/nethet
A bioconductor package for high-dimensional exploration of biological network heterogeneity

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Functions
224
Source code
18
Man pages
113
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FrankD/nethet: A bioconductor package for high-dimensional exploration of biological network heterogeneity
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API

API for FrankD/nethet
A bioconductor package for high-dimensional exploration of biological network heterogeneity

Global functions
EXPStep.mix Man page Source code
MStepGlasso Man page Source code
NetHet-package Man page
agg.pval Man page Source code
agg.score.iriz.scale Man page Source code
agg.score.iriz.shift Man page Source code
aggpval Man page Source code
aic.glasso Man page Source code
beta.mat Man page Source code
beta.mat.diffregr Man page Source code
bic.glasso Man page Source code
buildDotPlotDataFrame Man page Source code
bwprun_mixglasso Man page Source code
cv.fold Man page Source code
cv.glasso Man page Source code
diffnet_multisplit Man page Source code
diffnet_pval Man page Source code
diffnet_singlesplit Man page Source code
diffregr_multisplit Man page Source code
diffregr_pval Man page Source code
diffregr_singlesplit Man page Source code
dot_plot Man page Source code
error.bars Man page
est2.my.ev2 Man page Source code
est2.my.ev2.diffregr Man page Source code
est2.my.ev3 Man page Source code
est2.my.ev3.diffregr Man page Source code
est2.ww.mat.diffregr Man page Source code
est2.ww.mat2 Man page Source code
est2.ww.mat2.diffregr Man page Source code
export_network Man page Source code
func.uinit Man page Source code
generate_2networks Man page Source code
generate_inv_cov Man page Source code
getinvcov Man page Source code
ggmgsa_multisplit Man page Source code
ggmgsa_singlesplit Man page Source code
glasso.invcor Man page Source code
glasso.invcov Man page Source code
glasso.parcor Man page Source code
gsea.highdimT2 Man page Source code
gsea.iriz Man page Source code
gsea.iriz.scale Man page Source code
gsea.iriz.shift Man page Source code
gsea.t2cov Man page Source code
het_cv_glasso Man page Source code
hugepath Man page Source code
inf.mat Man page Source code
invcov2parcor Man page Source code
invcov2parcor_array Man page Source code
lambda.max Man page Source code
lambdagrid_lin Man page Source code
lambdagrid_mult Man page Source code
loglik_mix Man page Source code
logratio Man page Source code
logratio.diffregr Man page Source code
make_grid Man page Source code
mcov Man page Source code
mixglasso Man page Source code
mixglasso_init Man page Source code
mixglasso_ncomp_fixed Man page Source code
mle.ggm Man page Source code
my.ev2.diffregr Man page Source code
my.p.adjust Man page Source code
my.ttest Man page Source code
my.ttest2 Man page Source code
mytrunc.method Man page Source code
perm.diffregr_pval Man page Source code
perm.diffregr_teststat Man page Source code
plot.diffnet Man page Source code
plot.diffregr Man page Source code
plot.ggmgsa Man page Source code
plot.nethetclustering Man page Source code
plotCV Man page Source code
plot_2networks Man page Source code
print.nethetsummary Man page Source code
q.matrix.diffregr Man page Source code
q.matrix.diffregr3 Man page Source code
q.matrix.diffregr4 Man page Source code
q.matrix3 Man page Source code
q.matrix4 Man page Source code
scatter_plot Man page Source code
screen_aic.glasso Man page Source code
screen_bic.glasso Man page Source code
screen_cv.glasso Man page Source code
screen_cv1se.lasso Man page Source code
screen_cvfix.lasso Man page Source code
screen_cvmin.lasso Man page Source code
screen_cvsqrt.lasso Man page Source code
screen_cvtrunc.lasso Man page Source code
screen_full Man page Source code
screen_shrink Man page Source code
shapiro_screen Man page Source code
sim_mix Man page Source code
sim_mix_networks Man page Source code
sparse_conc Man page Source code
summary.diffnet Man page Source code
summary.diffregr Man page Source code
summary.ggmgsa Man page Source code
summary.nethetclustering Man page Source code
sumoffdiag Man page Source code
symmkldist Man page Source code
t2cov.lr Man page Source code
t2diagcov.lr Man page Source code
test.sd Man page Source code
test.t2 Man page Source code
tr Man page Source code
twosample_single_regr Man page Source code
w.kldist Man page Source code
ww.mat Man page Source code
ww.mat.diffregr Man page Source code
ww.mat2 Man page Source code
ww.mat2.diffregr Man page Source code
FrankD/nethet documentation built on Oct. 5, 2020, 8:22 a.m.

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