Files in FrankD/nethet
A bioconductor package for high-dimensional exploration of biological network heterogeneity
DESCRIPTION
NAMESPACE
R/auxfunc.R
R/cvglasso.R
R/diffnet.R
R/diffregr.R
R/ggmgsa.R
R/mixglasso.R
R/nethet.R
R/netplot.R
R/netsim.R
README.md
inst/NEWS
man/EXPStep.mix.Rd
man/MStepGlasso.Rd
man/NetHet-package.Rd
man/agg.pval.Rd
man/agg.score.iriz.scale.Rd
man/agg.score.iriz.shift.Rd
man/aggpval.Rd
man/aic.glasso.Rd
man/beta.mat.Rd
man/beta.mat.diffregr.Rd
man/bic.glasso.Rd
man/buildDotPlotDataFrame.Rd
man/bwprun_mixglasso.Rd
man/cv.fold.Rd
man/cv.glasso.Rd
man/diffnet_multisplit.Rd
man/diffnet_pval.Rd
man/diffnet_singlesplit.Rd
man/diffregr_multisplit.Rd
man/diffregr_pval.Rd
man/diffregr_singlesplit.Rd
man/dot_plot.Rd
man/error.bars.Rd
man/est2.my.ev2.Rd
man/est2.my.ev2.diffregr.Rd
man/est2.my.ev3.Rd
man/est2.my.ev3.diffregr.Rd
man/est2.ww.mat.diffregr.Rd
man/est2.ww.mat2.Rd
man/est2.ww.mat2.diffregr.Rd
man/export_network.Rd
man/func.uinit.Rd
man/generate_2networks.Rd
man/generate_inv_cov.Rd
man/getinvcov.Rd
man/ggmgsa_multisplit.Rd
man/ggmgsa_singlesplit.Rd
man/glasso.invcor.Rd
man/glasso.invcov.Rd
man/glasso.parcor.Rd
man/gsea.highdimT2.Rd
man/gsea.iriz.Rd
man/gsea.iriz.scale.Rd
man/gsea.iriz.shift.Rd
man/gsea.t2cov.Rd
man/het_cv_glasso.Rd
man/hugepath.Rd
man/inf.mat.Rd
man/invcov2parcor.Rd
man/invcov2parcor_array.Rd
man/lambda.max.Rd
man/lambdagrid_lin.Rd
man/lambdagrid_mult.Rd
man/loglik_mix.Rd
man/logratio.Rd
man/logratio.diffregr.Rd
man/make_grid.Rd
man/mcov.Rd
man/mixglasso.Rd
man/mixglasso_init.Rd
man/mixglasso_ncomp_fixed.Rd
man/mle.ggm.Rd
man/my.ev2.diffregr.Rd
man/my.p.adjust.Rd
man/my.ttest.Rd
man/my.ttest2.Rd
man/mytrunc.method.Rd
man/perm.diffregr_pval.Rd
man/perm.diffregr_teststat.Rd
man/plot.diffnet.Rd
man/plot.diffregr.Rd
man/plot.ggmgsa.Rd
man/plot.nethetclustering.Rd
man/plotCV.Rd
man/plot_2networks.Rd
man/print.nethetsummary.Rd
man/q.matrix.diffregr.Rd
man/q.matrix.diffregr3.Rd
man/q.matrix.diffregr4.Rd
man/q.matrix3.Rd
man/q.matrix4.Rd
man/scatter_plot.Rd
man/screen_aic.glasso.Rd
man/screen_bic.glasso.Rd
man/screen_cv.glasso.Rd
man/screen_cv1se.lasso.Rd
man/screen_cvfix.lasso.Rd
man/screen_cvmin.lasso.Rd
man/screen_cvsqrt.lasso.Rd
man/screen_cvtrunc.lasso.Rd
man/screen_full.Rd
man/screen_shrink.Rd
man/shapiro_screen.Rd
man/sim_mix.Rd
man/sim_mix_networks.Rd
man/sparse_conc.Rd
man/summary.diffnet.Rd
man/summary.diffregr.Rd
man/summary.ggmgsa.Rd
man/summary.nethetclustering.Rd
man/sumoffdiag.Rd
man/symmkldist.Rd
man/t2cov.lr.Rd
man/t2diagcov.lr.Rd
man/test.sd.Rd
man/test.t2.Rd
man/tr.Rd
man/twosample_single_regr.Rd
man/w.kldist.Rd
man/ww.mat.Rd
man/ww.mat.diffregr.Rd
man/ww.mat2.Rd
man/ww.mat2.diffregr.Rd
src/betamat_diffnet.c
tests/Examples/diffnet_ex.R
tests/Examples/diffnet_ss_ex.R
tests/Examples/diffregr_ex.R
tests/Examples/diffregr_ss_ex.R
tests/Examples/ggmgsa_ex.R
tests/Examples/mixglasso_ex.R
tests/testthat.R
tests/testthat/test_mixglasso.R
tests/testthat/test_netsim.R
vignettes/nethet.Rnw
vignettes/nethet.bib
