Files in FrankD/nethet

A bioconductor package for high-dimensional exploration of biological network heterogeneity

R/auxfunc.R R/cvglasso.R R/diffnet.R R/diffregr.R R/ggmgsa.R R/mixglasso.R R/nethet.R R/netplot.R R/netsim.R README.md man/EXPStep.mix.Rd man/MStepGlasso.Rd man/NetHet-package.Rd man/agg.pval.Rd man/agg.score.iriz.scale.Rd man/agg.score.iriz.shift.Rd man/aggpval.Rd man/aic.glasso.Rd man/beta.mat.Rd man/beta.mat.diffregr.Rd man/bic.glasso.Rd man/buildDotPlotDataFrame.Rd man/bwprun_mixglasso.Rd man/cv.fold.Rd man/cv.glasso.Rd man/diffnet_multisplit.Rd man/diffnet_pval.Rd man/diffnet_singlesplit.Rd man/diffregr_multisplit.Rd man/diffregr_pval.Rd man/diffregr_singlesplit.Rd man/dot_plot.Rd man/error.bars.Rd man/est2.my.ev2.Rd man/est2.my.ev2.diffregr.Rd man/est2.my.ev3.Rd man/est2.my.ev3.diffregr.Rd man/est2.ww.mat.diffregr.Rd man/est2.ww.mat2.Rd man/est2.ww.mat2.diffregr.Rd man/export_network.Rd man/func.uinit.Rd man/generate_2networks.Rd man/generate_inv_cov.Rd man/getinvcov.Rd man/ggmgsa_multisplit.Rd man/ggmgsa_singlesplit.Rd man/glasso.invcor.Rd man/glasso.invcov.Rd man/glasso.parcor.Rd man/gsea.highdimT2.Rd man/gsea.iriz.Rd man/gsea.iriz.scale.Rd man/gsea.iriz.shift.Rd man/gsea.t2cov.Rd man/het_cv_glasso.Rd man/hugepath.Rd man/inf.mat.Rd man/invcov2parcor.Rd man/invcov2parcor_array.Rd man/lambda.max.Rd man/lambdagrid_lin.Rd man/lambdagrid_mult.Rd man/loglik_mix.Rd man/logratio.Rd man/logratio.diffregr.Rd man/make_grid.Rd man/mcov.Rd man/mixglasso.Rd man/mixglasso_init.Rd man/mixglasso_ncomp_fixed.Rd man/mle.ggm.Rd man/my.ev2.diffregr.Rd man/my.p.adjust.Rd man/my.ttest.Rd man/my.ttest2.Rd man/mytrunc.method.Rd man/perm.diffregr_pval.Rd man/perm.diffregr_teststat.Rd man/plot.diffnet.Rd man/plot.diffregr.Rd man/plot.ggmgsa.Rd man/plot.nethetclustering.Rd man/plotCV.Rd man/plot_2networks.Rd man/print.nethetsummary.Rd man/q.matrix.diffregr.Rd man/q.matrix.diffregr3.Rd man/q.matrix.diffregr4.Rd man/q.matrix3.Rd man/q.matrix4.Rd man/scatter_plot.Rd man/screen_aic.glasso.Rd man/screen_bic.glasso.Rd man/screen_cv.glasso.Rd man/screen_cv1se.lasso.Rd man/screen_cvfix.lasso.Rd man/screen_cvmin.lasso.Rd man/screen_cvsqrt.lasso.Rd man/screen_cvtrunc.lasso.Rd man/screen_full.Rd man/screen_shrink.Rd man/shapiro_screen.Rd man/sim_mix.Rd man/sim_mix_networks.Rd man/sparse_conc.Rd man/summary.diffnet.Rd man/summary.diffregr.Rd man/summary.ggmgsa.Rd man/summary.nethetclustering.Rd man/sumoffdiag.Rd man/symmkldist.Rd man/t2cov.lr.Rd man/t2diagcov.lr.Rd man/test.sd.Rd man/test.t2.Rd man/tr.Rd man/twosample_single_regr.Rd man/w.kldist.Rd man/ww.mat.Rd man/ww.mat.diffregr.Rd man/ww.mat2.Rd man/ww.mat2.diffregr.Rd tests/Examples/diffnet_ex.R tests/Examples/diffnet_ss_ex.R tests/Examples/diffregr_ex.R tests/Examples/diffregr_ss_ex.R tests/Examples/ggmgsa_ex.R tests/Examples/mixglasso_ex.R tests/testthat.R tests/testthat/test_mixglasso.R tests/testthat/test_netsim.R