Description Usage Arguments Details Value Examples
Given a list of TCGA disease types, returns a list of pre-assigned colors, adding new diseases/colors dynamically.
1 | getColorsForDiseases(theDiseaseList)
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theDiseaseList |
A vector of diseases-known diseases are "ACC", "BLCA", "BRCA", "CESC", "CHOL", "CNTL", "COAD", "DLBC", "ESCA", "GBM", "HNSC", "KICH", "KIRC", "KIRP", "LAML", "LGG", "LIHC", "LUAD", "LUSC", "MESO", "OV", "PAAD", "PCPG", "PRAD", "READ", "SARC", "SKCM", "STAD", "TCGT", "THCA", "UCEC", "UCS", "UVM" |
Given a list of TCGA disease types, returns a list of pre-assigned colors, adding new diseases/colors dynamically.
A vector of color strings with diseases as the names() for the vector. Known disease colors are: "darkcyan", "green", "blue", "purple", "firebrick", "midnightblue", "brown", "red", "lightgray", "darkgreen", "magenta", "cadetblue1", "goldenrod", "violet", "grey", "olivedrab", "cyan", "gold", "turquoise", "chocolate", "pink", "dodgerblue", "mediumvioletred", "forestgreen", "brown1", "bisque", "darkgray", "orange", "khaki", "seagreen", "tomato", "sienna", "darkorchid".
1 2 3 4 5 | #getColorsForDiseases(c("ACC", "BLCA",
# "BRCA", "CESC", "CHOL", "CNTL", "COAD", "FOO", "DLBC", "ESCA",
# "GBM", "HNSC", "KICH", "KIRC", "KIRP", "LAML", "LGG", "LIHC",
# "LUAD", "LUSC", "MESO", "OV", "PAAD", "PCPG", "BAR", "PRAD", "READ",
# "SARC", "SKCM", "STAD", "TCGT", "THCA", "UCEC", "UCS", "UVM")))
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