Files in GeneSurvey/TCGAGeneReport
Access to Gene Report Data

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/GSColors.R R/TCGAGeneReport.R R/filterForCommonSamples.R R/getContrast.R R/getData.R R/getDataClinical.R R/getDataObject.R R/getDataPlatform.R R/getDelta.R R/getImputedNAs.R R/getMetadataPop.R R/getMetadataTcga_Name.R R/getMetadata_Gene.R R/getMetadata_HG.R R/getMetadata_Probe.R R/getMirs.R R/getNames.R R/getNames_ProbeFromGeneSymbol.R R/getOneToOne.R R/plot.R R/plotAssays.R R/plotGeneric.R R/plotHeatmap.R R/zzz.R README.md
TCGAGeneReport.Rproj
inst/TcgaGSData/TcgaGSData.jar
inst/TcgaGSData/TcgaIdConverter.jar
inst/TcgaGSData/commons-codec-1.9.jar
inst/TcgaGSData/commons-compress-1.7.jar
inst/TcgaGSData/commons-io-2.4.jar
inst/TcgaGSData/commons-net-3.3.jar
man/filterForCommonSamples.Rd man/geneSymbolsForDataset.Rd man/geneSymbolsMatchDataset.Rd man/get.Chromosome.Rd man/get.Data.Rd man/get.DerivedFrom.Rd man/get.GeneId.Rd man/get.GeneStructure.Rd man/get.GeneSymbol.Rd man/get.GenomeAnnotations.Rd man/get.LocationEnd.Rd man/get.LocationStart.Rd man/get.MimatId.Rd man/get.MirId.Rd man/get.MirType.Rd man/get.Name.Rd man/get.ProbeLocation.Rd man/get.SampleAnnotations.Rd man/get.Strand.Rd man/get.TissueAnnotations.Rd man/get.VersionIndex.Rd man/getColorsForDiseases.Rd man/getContrast.Rd man/getDataClinical.Rd man/getDataMatrix_GeneSymbol_Meth27.Rd man/getDataMatrix_GeneSymbol_Meth450.Rd man/getDataObject_CombinedHsaMimat_miRNASeq.Rd man/getDataObject_GeneSymbol_Meth27.Rd man/getDataObject_GeneSymbol_Meth450.Rd man/getDataObject_GeneSymbol_Mutations.Rd man/getDataObject_GeneSymbol_RnaSeq.Rd man/getDataObject_GeneSymbol_RnaSeq2.Rd man/getDataObject_GeneSymbol_SNP6.Rd man/getDataObject_Probe_Meth27.Rd man/getDataObject_Probe_Meth450.Rd man/getDataPlatform_CombinedHsaMimat_miRNASeq.Rd man/getDataPlatform_GeneSymbol_Mutations.Rd man/getDataPlatform_GeneSymbol_RnaSeq.Rd man/getDataPlatform_GeneSymbol_RnaSeq2.Rd man/getDataPlatform_GeneSymbol_SNP6.Rd man/getDataPlatform_Probe_Meth27.Rd man/getDataPlatform_Probe_Meth450.Rd man/getDataVersion.Rd man/getData_CombinedHsaMimat_miRNASeq.Rd man/getData_GeneSymbol_Mutations.Rd man/getData_GeneSymbol_RnaSeq.Rd man/getData_GeneSymbol_RnaSeq2.Rd man/getData_GeneSymbol_SNP6.Rd man/getData_Probe_Meth27.Rd man/getData_Probe_Meth450.Rd man/getImputedNAs_CombinedHsaMimat_miRNASeq.Rd man/getImputedNAs_GeneSymbol_RnaSeq.Rd man/getImputedNAs_GeneSymbol_RnaSeq2.Rd man/getImputedNAs_GeneSymbol_SNP6.Rd man/getImputedNAs_Probe_Meth27.Rd man/getImputedNAs_Probe_Meth450.Rd man/getMetadataPop_BarcodeDisease.Rd man/getMetadataPop_BarcodeSamplecode.Rd man/getMetadataPop_PatientDisease.Rd man/getMetadata_GeneByNeighbor_HG18.Rd man/getMetadata_GeneByNeighbor_HG19.Rd man/getMetadata_GeneByNeighbor_RnaSeq.Rd man/getMetadata_GeneByNeighbor_RnaSeq2.Rd man/getMetadata_Gene_HG18.Rd man/getMetadata_Gene_HG19.Rd man/getMetadata_Gene_Mutations.Rd man/getMetadata_Gene_RnaSeq.Rd man/getMetadata_Gene_RnaSeq2.Rd man/getMetadata_ProbeByNeighbor_Meth27.Rd man/getMetadata_ProbeByNeighbor_Meth450.Rd man/getMetadata_Probe_Meth27.Rd man/getMetadata_Probe_Meth450.Rd man/getMirs_List_Mimat.Rd man/getMirs_List_Mir.Rd man/getMirs_Metadata_Mimat.Rd man/getMirs_Metadata_Mir.Rd man/getNames_CombinedHsaMimat_miRNASeq.Rd man/getNames_GeneSymbol_Meth27.Rd man/getNames_GeneSymbol_Meth450.Rd man/getNames_GeneSymbol_Mutations.Rd man/getNames_GeneSymbol_RnaSeq.Rd man/getNames_GeneSymbol_RnaSeq2.Rd man/getNames_GeneSymbol_SNP6.Rd man/getNames_ProbeFromGeneSymbol_Meth27.Rd man/getNames_ProbeFromGeneSymbol_Meth450.Rd man/getNames_Probe_Meth27.Rd man/getNames_Probe_Meth450.Rd man/getOneToOne_GeneSymbol_List.Rd man/getOneToOne_GeneSymbol_UCID.Rd man/getOneToOne_UCID_GeneSymbol.Rd man/getOneToOne_UCSC_List.Rd man/getSynonyms.Rd man/initGeneReport.Rd man/loadDataObject.Rd man/plotAssays.Rd man/plotGenericOutput.Rd man/plotHeatmapOutput.Rd man/plot_CombinedHsaMimat_miRNASeq.Rd man/plot_GeneSymbol_Meth27.Rd man/plot_GeneSymbol_Meth450.Rd man/plot_GeneSymbol_Mutations.Rd man/plot_GeneSymbol_RnaSeq.Rd man/plot_GeneSymbol_RnaSeq2.Rd man/plot_GeneSymbol_SNP6.Rd man/plot_Probe_Meth27.Rd man/plot_Probe_Meth450.Rd
GeneSurvey/TCGAGeneReport documentation built on May 8, 2017, noon