Description Usage Arguments Value Examples
View source: R/getMetadataPop.R
A list of diseases types for all TCGA patient ids.
1 | getMetadataPop_PatientDisease(theZipFile="/rsrch1/bcb/batcheffects/GENE_REPORT/GeneSurvey.zip", theVerboseFlag = FALSE)
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theZipFile |
Default: For DQS Servers. If you are on a server where the GENE_REPORT directory is on a different path, you can pass in a value to override the default of "/rsrch1/bcb/batcheffects/GENE_REPORT/GeneSurvey.zip". NOTE: this is a subdirectory of GENE_REPORT. |
theVerboseFlag |
Default: FALSE. TRUE means write all output, which can be very verbose. |
A vector of strings with names() being TCGA patient ids.
1 | #getMetadataPop_PatientDisease()
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