Description Usage Arguments Value Examples
View source: R/getMetadata_Probe.R
Get the metadata about the given probe.
1 | getMetadata_Probe_Meth27(theProbe, theZipFile="/rsrch1/bcb/batcheffects/GENE_REPORT/GeneSurvey.zip", theVerboseFlag = FALSE)
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theProbe |
A vector of probe names as found in the getNames_ function for this data type. |
theZipFile |
Default: For DQS Servers. If you are on a server where the GENE_REPORT directory is on a different path, you can pass in a value to override the default of "/rsrch1/bcb/batcheffects/GENE_REPORT/GeneSurvey.zip". NOTE: this is a subdirectory of GENE_REPORT. |
theVerboseFlag |
Default: FALSE. TRUE means write all output, which can be very verbose. |
The return value is a list of objects with probe ids and names(). The following functions work to pull data out of the object.
get.Name |
get.Name |
get.Chromosome |
get.Chromosome |
get.ProbeLocation |
get.ProbeLocation |
get.Strand |
get.Strand |
get.GeneStructure |
get.GeneStructure |
1 | #getMetadata_Probe_Meth27(getNames_Probe_Meth27()[100])
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