get_phenotype | R Documentation |
Subset a larger wide-format phenotype table to a defined phenotype.
get_phenotype(phenotype_table, phenotype, acc_col = "ACC_ID", specific = NULL)
phenotype_table |
a table containing phenotyping measurements, and accession ids (see below) |
phenotype |
a specific phenotype from the phenotype table. Must match to a column name of the phenotype table |
acc_col |
the column that contains accession identifiers. |
specific |
(optional) treatment column that was used to split samples for specific GWAS. |
This function takes a phenotype table in wide format, and returns that phenotype. Optionally includes a "specific" variable.
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