Global functions | |
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%<>% | Man page |
%>% | Man page |
.onAttach | Source code |
DE_GSE8057 | Man page |
DataSet | Man page |
GI2EG | Source code |
GSEA | Man page Source code |
Gff2GeneTable | Man page Source code |
KEGG_convert | Source code |
`[.compareClusterResult` | Source code |
`[[.compareClusterResult` | Source code |
add_GO_Ontology | Source code |
append_kegg_category | Man page Source code |
arrange | Man page |
arrange.compareClusterResult | Source code |
arrange.enrichResult | Source code |
as.data.frame.groupGOResult | Source code |
bitr | Man page Source code |
bitr_kegg | Man page Source code |
browseKEGG | Man page Source code |
buildGOmap | Man page |
clusterProfiler | Man page |
clusterProfiler-package | Man page |
cnetplot | Man page |
compareCluster | Man page Source code |
dim.compareClusterResult | Source code |
dotplot | Man page |
download.KEGG.Path | Source code |
download_KEGG | Man page Source code |
dropGO | Man page Source code |
emapplot | Man page |
enrichDAVID | Man page Source code |
enrichGO | Man page Source code |
enrichKEGG | Man page Source code |
enrichMKEGG | Man page Source code |
enrichPC | Man page Source code |
enrichWP | Man page Source code |
enricher | Man page Source code |
excludeGOlevel | Source code |
excludeGOterm | Source code |
filter | Man page |
filter.compareClusterResult | Source code |
filter.enrichResult | Source code |
gcSample | Man page |
geneID | Man page |
geneID.groupGOResult | Source code |
geneInCategory | Man page |
geneInCategory.groupGOResult | Source code |
getGOLevel | Source code |
getPPI | Man page Source code |
getPPI_oldversion | Source code |
getTaxID | Man page Source code |
getTaxInfo | Man page Source code |
getTaxInfo_stringdb | Source code |
get_GO2Ontology_table | Source code |
get_GO2TERM_table | Source code |
get_GOTERM | Source code |
get_GO_data | Source code |
get_KEGG_Env | Source code |
get_go_ontology | Source code |
get_kegg_species | Source code |
get_pc_data | Source code |
get_pc_gmtfile | Source code |
get_wp_data | Source code |
get_wp_gmtfile | Source code |
get_wp_organisms | Man page Source code |
go2ont | Man page Source code |
go2term | Man page Source code |
gofilter | Man page Source code |
goplot | Man page |
groupGO | Man page Source code |
groupGOResult-class | Man page |
group_by | Man page |
group_by.compareClusterResult | Source code |
group_by.enrichResult | Source code |
gseGO | Man page Source code |
gseKEGG | Man page Source code |
gseMKEGG | Man page Source code |
gsePC | Man page Source code |
gseWP | Man page Source code |
gseaplot | Man page |
gsfilter | Man page |
gson_GO | Man page Source code |
gson_KEGG | Man page Source code |
gson_KEGG_mapper | Man page Source code |
gson_KO | Source code |
gson_WP | Man page Source code |
gson_cpd | Source code |
head.compareClusterResult | Source code |
heatplot | Man page |
idType | Man page Source code |
keepGOlevel | Source code |
keepGOterm | Source code |
kegg_category | Man page |
kegg_category_data | Source code |
kegg_release | Source code |
kegg_rest | Source code |
kegg_species | Man page |
kegg_species_data | Source code |
kegg_taxa | Source code |
ko2name | Man page |
merge_result | Man page |
mutate | Man page |
mutate.compareClusterResult | Source code |
mutate.enrichResult | Source code |
n | Man page |
networkParamsParser | Source code |
parseEmbl | Source code |
parseEmblItem | Source code |
plotGOgraph | Man page Source code |
prepare_KEGG | Source code |
prepare_WP_data | Source code |
prepare_pc_data | Source code |
read.blast2go | Man page |
read.gaf | Man page |
read.gmt | Man page |
read.gmt.pc | Man page Source code |
read.gmt.pc_internal | Source code |
read.gmt.wp | Man page |
readGff | Source code |
reexports | Man page |
removeEmptyEntry.list | Source code |
remove_db_prefix | Source code |
rename | Man page |
rename.compareClusterResult | Source code |
rename.enrichResult | Source code |
ridgeplot | Man page |
search_kegg_organism | Man page Source code |
select | Man page |
select.compareClusterResult | Source code |
select.enrichResult | Source code |
setReadable | Man page |
show,groupGOResult-method | Man page |
simplify | Man page |
simplify,compareClusterResult-method | Man page |
simplify,enrichResult-method | Man page |
simplify,gseaResult-method | Man page |
simplify_ALL | Source code |
simplify_internal | Source code |
slice | Man page |
slice.compareClusterResult | Source code |
slice.enrichResult | Source code |
stringdb_version | Source code |
summarise | Man page |
summarise.compareClusterResult | Source code |
summarise.enrichResult | Source code |
tail.compareClusterResult | Source code |
taxID2name | Source code |
uniprot_get | Man page Source code |
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