alignBins_internal: aligns fwd and rev sequences to a profile

Description Usage

View source: R/alignBins.R

Description

a custom guide tree is constructed to ensure that the alignment of the fwd reads does not interfere with the alignment of the rev reads and vice versa.

Usage

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alignBins_internal(cur_fwd_seqs, cur_rev_seqs, profile_file, working_dir,
  pid)

HIVDiversity/MotifBinner2 documentation built on May 6, 2019, 6:44 p.m.