pairwiseMSA: Generates a MSA relative to a profile without any inserts...
In HIVDiversity/MotifBinner2: Processes NGS Primer ID Datasets
Description
Sequence quality information will be ignored.
Usage
1
pairwiseMSA(reads, ref_seq)
Arguments
reads
Reads either as a ShortRead or DNAStringSet object with the @sread and @id fields.
ref_seq
The profile sequence to use as a reference
HIVDiversity/MotifBinner2 documentation built on May 6, 2019, 6:44 p.m.
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Description
Sequence quality information will be ignored.
Usage
1 | pairwiseMSA(reads, ref_seq)
|
Arguments
reads |
Reads either as a ShortRead or DNAStringSet object with the @sread and @id fields. |
ref_seq |
The profile sequence to use as a reference |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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